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PBAL39_13857 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13857" - ATP-dependent exoDNAse (Exonuclease V) in Pedobacter sp. BAL39
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13857ATP-dependent exoDNAse (Exonuclease V) (477 aa)    
Predicted Functional Partners:
PBAL39_12227
DNA helicase (1080 aa)
 
  0.954
PBAL39_13847
Putative methyltransferase (174 aa)
 
          0.760
PBAL39_13862
Uncharacterized protein (226 aa)
              0.706
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.690
PBAL39_23918
Uncharacterized protein (210 aa)
   
          0.675
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (241 aa)
   
          0.656
PBAL39_13852
Uncharacterized protein (276 aa)
              0.648
PBAL39_21660
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
 
 
  0.647
PBAL39_05768
Protein TonB ; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (273 aa)
   
          0.580
PBAL39_03934
Uncharacterized protein (160 aa)
   
          0.566
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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