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PBAL39_14184 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14184" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14184Putative outer membrane protein (199 aa)    
Predicted Functional Partners:
PBAL39_11822
Histidine kinase (1198 aa)
   
        0.597
PBAL39_07720
Two-component hybrid sensor and regulator (1253 aa)
   
        0.581
PBAL39_20985
Uncharacterized protein (92 aa)
   
          0.577
PBAL39_15129
Zinc-type alcohol dehydrogenase (385 aa)
 
        0.570
PBAL39_14189
Putative beta-lactamase (490 aa)
              0.552
PBAL39_13075
Uncharacterized protein (231 aa)
 
          0.540
PBAL39_07465
Putative oxidoreductase protein, short-chain dehydrogenase reductase (SDR)family (295 aa)
 
        0.539
PBAL39_12453
DNA topoisomerase IB (355 aa)
 
          0.528
PBAL39_16896
ATP-dependent DNA ligase (908 aa)
 
          0.509
PBAL39_08514
Sensor histidine kinase/response regulator fusion protein (1160 aa)
   
        0.507
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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