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PBAL39_14284 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14284" - RNA polymerase ECF-type sigma factor, putative in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14284RNA polymerase ECF-type sigma factor, putative (195 aa)    
Predicted Functional Partners:
PBAL39_00255
RNA polymerase, sigma-E factor heat shock and oxidative stress (190 aa)
   
          0.664
PBAL39_08791
RNA polymerase, sigma-E factor heat shock and oxidative stress (183 aa)
   
          0.642
PBAL39_14279
Uncharacterized protein (86 aa)
              0.636
PBAL39_14289
Putative anti-sigma factor (396 aa)
              0.565
PBAL39_11327
Putative RNA polymerase ECF-type sigma factor (191 aa)
   
          0.445
PBAL39_11777
Putative RNA polymerase sigma factor (194 aa)
   
          0.443
PBAL39_14274
Cold shock protein (63 aa)
              0.417
PBAL39_24038
RNA polymerase sigma factor/ECF subfamily (Sigma-70) (191 aa)
   
          0.413
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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