STRINGSTRING
EDM34742.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34742.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34742.1annotation not available (311 aa)    
Predicted Functional Partners:
EDM37246.1
COG0463 Glycosyltransferases involved in cell wall biogenesis (249 aa)
          0.593
EDM37245.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase (423 aa)
      0.585
EDM38750.1
Uncharacterized protein; COG3920 Signal transduction histidine kinase (99 aa)
   
          0.469
EDM37121.1
COG0463 Glycosyltransferases involved in cell wall biogenesis (199 aa)
   
          0.469
EDM37423.1
Uncharacterized protein; COG0442 Prolyl-tRNA synthetase (317 aa)
   
          0.451
EDM37560.1
Putative LPS biosynthesis related glycosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis (267 aa)
 
          0.436
EDM34743.1
Pyruvate dehydrogenase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family (579 aa)
              0.426
EDM37182.1
COG0463 Glycosyltransferases involved in cell wall biogenesis (263 aa)
          0.423
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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