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PBAL39_14594 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14594" - Short-chain dehydrogenase/reductase SDR in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14594Short-chain dehydrogenase/reductase SDR (247 aa)    
Predicted Functional Partners:
PBAL39_12890
Putative short-chain dehydrogenase (143 aa)
   
          0.753
PBAL39_14599
Uncharacterized protein (116 aa)
              0.659
PBAL39_18534
Short chain dehydrogenase (321 aa)
   
   
    0.643
PBAL39_08085
3-oxoacyl-[acyl-carrier-protein] reductase (247 aa)
   
   
0.627
PBAL39_14604
Uncharacterized protein (183 aa)
              0.611
PBAL39_09536
Oxidoreductase (261 aa)
 
   
    0.597
PBAL39_15529
Uncharacterized protein (322 aa)
   
          0.574
PBAL39_19379
Phosphatidylserine decarboxylase (256 aa)
   
   
0.566
PBAL39_18734
Short-chain dehydrogenase/reductase SDR (285 aa)
 
   
    0.535
PBAL39_22620
Short-chain dehydrogenase/reductase SDR (276 aa)
 
   
    0.517
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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