Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Ribose 5-phosphate isomerase (227 aa)
Predicted Functional Partners:
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (509 aa)
Transketolase (809 aa)
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion (658 aa)
Ribulose-phosphate 3-epimerase (223 aa)
Probable transaldolase ; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (219 aa)
Ribose-phosphate pyrophosphokinase (313 aa)
Sugar phosphate isomerase, KpsF/GutQ family protein (321 aa)
6-phosphogluconate dehydrogenase, decarboxylating ; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (466 aa)
Sugar isomerase (SIS) (194 aa)
Putative AraC family transcriptional regulatory protein (267 aa)
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596 Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39