STRINGSTRING
PBAL39_14714 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14714" - Heme oxygenase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14714Heme oxygenase (185 aa)    
Predicted Functional Partners:
PBAL39_20029
Phytochrome-like protein (509 aa)
   
          0.756
PBAL39_25550
Multi-sensor Signal Transduction Histidine Kinase (737 aa)
 
          0.751
PBAL39_11040
Uncharacterized protein (151 aa)
   
          0.619
PBAL39_24385
Uncharacterized protein (318 aa)
   
          0.556
PBAL39_16741
Uncharacterized protein (437 aa)
   
          0.551
PBAL39_14719
Uncharacterized protein (927 aa)
              0.546
PBAL39_12820
Sensor histidine kinase (528 aa)
   
          0.515
PBAL39_10491
Uncharacterized protein (235 aa)
   
          0.478
PBAL39_19484
Uncharacterized protein (694 aa)
   
          0.464
PBAL39_17964
Uncharacterized protein (260 aa)
   
          0.437
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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