STRINGSTRING
PBAL39_14729 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14729" - Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14729Transcriptional regulator (196 aa)    
Predicted Functional Partners:
PBAL39_14734
Putative transporter (425 aa)
 
   
  0.894
PBAL39_09101
Uncharacterized protein (293 aa)
   
          0.593
PBAL39_14739
Possible ATP-dependent RNA helicase (376 aa)
              0.519
PBAL39_08165
Membrane fusion efflux protein, putative (452 aa)
 
     
  0.501
PBAL39_10281
Uncharacterized protein (469 aa)
   
          0.492
PBAL39_03374
Putative outer membrane protein (1173 aa)
   
          0.486
PBAL39_09846
Uncharacterized protein (599 aa)
   
          0.480
PBAL39_09851
Uncharacterized protein (606 aa)
   
          0.477
PBAL39_14724
Uncharacterized protein (398 aa)
              0.470
PBAL39_12950
Uncharacterized protein (459 aa)
   
          0.464
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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