STRINGSTRING
PBAL39_14764 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14764" - Possible TonB-dependent receptor in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14764Possible TonB-dependent receptor (821 aa)    
Predicted Functional Partners:
PBAL39_14819
Uncharacterized protein (505 aa)
   
          0.696
PBAL39_05468
Uncharacterized protein (171 aa)
   
          0.692
PBAL39_19230
Putative hemin receptor (496 aa)
   
          0.665
PBAL39_00030
Uncharacterized protein (169 aa)
   
          0.663
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.654
PBAL39_24410
Possible gliding motility-related protein (194 aa)
   
          0.650
PBAL39_19639
Protein TonB ; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (281 aa)
   
          0.631
PBAL39_14814
Putative outer membrane protein (985 aa)
   
          0.627
PBAL39_20620
Gliding motility-related protein possible outer membrane protein (216 aa)
   
          0.612
PBAL39_12623
Uncharacterized protein (423 aa)
   
          0.612
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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