STRINGSTRING
PBAL39_14874 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_14874" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_14874Uncharacterized protein (788 aa)    
Predicted Functional Partners:
PBAL39_18264
Outer membrane protein (785 aa)
   
          0.723
PBAL39_01407
Uncharacterized protein (506 aa)
   
          0.619
PBAL39_21520
Uncharacterized protein (132 aa)
   
          0.599
PBAL39_18849
Putative outer membrane protein (551 aa)
   
          0.567
PBAL39_05383
Transporter, MFS superfamily protein (431 aa)
   
          0.546
PBAL39_18844
Putative outer membrane protein (1012 aa)
   
          0.533
PBAL39_08756
Uncharacterized protein (96 aa)
   
          0.530
PBAL39_08646
Uncharacterized protein (461 aa)
   
          0.525
PBAL39_21550
Uncharacterized protein ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (136 aa)
   
          0.509
PBAL39_07085
TonB-dependent receptor (952 aa)
   
          0.493
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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