• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EDM37720.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37720.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37720.1Uncharacterized protein; COG0662 Mannose-6-phosphate isomerase (197 aa)    
Predicted Functional Partners:
EDM37719.1
RNA polymerase, sigma-24 subunit, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family (145 aa)
              0.845
EDM37060.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain (1219 aa)
       
  0.823
EDM34500.1
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (716 aa)
       
  0.783
EDM37721.1
Putative NADH dehydrogenase with NAD(P)-binding domain; COG0702 Predicted nucleoside-diphosphate-sugar epimerases (219 aa)
              0.682
hisI
Histidine biosynthesis bifunctional protein HisIE; COG0139 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family (196 aa)
     
  0.668
EDM35495.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (739 aa)
       
    0.622
EDM35608.1
COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (418 aa)
   
  0.617
EDM33962.1
Glucosamine-6-phosphate deaminase-like protein; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase (639 aa)
       
    0.583
EDM34250.1
COG1109 Phosphomannomutase (577 aa)
   
  0.537
EDM35252.1
COG1109 Phosphomannomutase (462 aa)
   
  0.537
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (12%) [HD]