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EDM37748.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37748.1" - TonB-dependent receptor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37748.1TonB-dependent receptor; COG1470 Predicted membrane protein (1149 aa)    
Predicted Functional Partners:
EDM37749.1
annotation not available (264 aa)
              0.770
EDM37272.1
Uncharacterized protein; COG1158 Transcription termination factor (469 aa)
 
          0.759
EDM37750.1
annotation not available (266 aa)
              0.752
EDM34046.1
COG3210 Large exoproteins involved in heme utilization or adhesion (452 aa)
 
          0.740
EDM34350.1
annotation not available (451 aa)
   
          0.539
EDM37747.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (404 aa)
              0.509
EDM38257.1
Uncharacterized protein; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (722 aa)
   
          0.508
EDM35167.1
COG0840 Methyl-accepting chemotaxis protein (1080 aa)
   
        0.483
EDM38377.1
COG1629 Outer membrane receptor proteins, mostly Fe transport (985 aa)
   
          0.475
EDM35450.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (1009 aa)
   
          0.401
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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