STRINGSTRING
PBAL39_15144 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15144" - Probable oxidoreductase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15144Probable oxidoreductase (517 aa)    
Predicted Functional Partners:
PBAL39_11352
Putative zinc protease ymxG (409 aa)
   
  0.971
atpG
F-ATPase gamma subunit ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (293 aa)
     
   
  0.967
PBAL39_25000
Putative zinc protease (424 aa)
     
  0.967
PBAL39_24995
Zinc protease (414 aa)
     
  0.967
PBAL39_24470
Putative zinc protease (954 aa)
     
  0.967
PBAL39_20179
Peptidase, M16 family protein (985 aa)
     
  0.967
PBAL39_00115
Putative zinc protease (938 aa)
     
  0.967
PBAL39_10076
Succinate dehydrogenase/fumarate reductase iron-sulfur (256 aa)
   
  0.960
PBAL39_19814
Putative bifunctional UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase/alanine racemase (824 aa)
   
 
  0.942
PBAL39_05718
NADH dehydrogenase I chain G (334 aa)
     
 
  0.941
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (4%) [HD]