STRINGSTRING
PBAL39_15189 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15189" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15189Uncharacterized protein (175 aa)    
Predicted Functional Partners:
PBAL39_15194
Response regulator receiver sensor signal transduction histidine kinase (120 aa)
              0.805
PBAL39_25635
Uncharacterized protein (172 aa)
   
          0.775
PBAL39_16756
Uncharacterized protein (170 aa)
   
          0.770
PBAL39_15199
GGDEF domain (277 aa)
              0.643
PBAL39_15184
Two-component response regulator (223 aa)
              0.598
PBAL39_15484
Uncharacterized protein (284 aa)
   
          0.565
PBAL39_04548
TraM-like protein (308 aa)
   
          0.535
PBAL39_09101
Uncharacterized protein (293 aa)
   
          0.532
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.516
PBAL39_15179
Twp-component sensor histidine kinase (401 aa)
              0.480
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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