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PBAL39_15199 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15199" - GGDEF domain in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15199GGDEF domain (277 aa)    
Predicted Functional Partners:
PBAL39_14669
Sensory box histidine kinase/response regulator (456 aa)
 
          0.690
PBAL39_15194
Response regulator receiver sensor signal transduction histidine kinase (120 aa)
              0.684
PBAL39_15189
Uncharacterized protein (175 aa)
              0.643
PBAL39_23582
Sensor protein fixL (394 aa)
 
          0.599
PBAL39_15204
Receiver component of a two-component response regulator (136 aa)
 
          0.556
PBAL39_03404
Sensory box histidine kinase/response regulator (195 aa)
   
          0.467
PBAL39_06096
PAS/PAC sensor signal transduction histidine kinase (410 aa)
 
          0.464
PBAL39_15184
Two-component response regulator (223 aa)
              0.460
PBAL39_05068
PAS (496 aa)
 
          0.441
PBAL39_17499
Histidine kinase sensor protein (350 aa)
 
            0.408
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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