STRINGSTRING
PBAL39_15219 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15219" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15219Uncharacterized protein (414 aa)    
Predicted Functional Partners:
PBAL39_04573
Conserved protein found in conjugate transposon (213 aa)
   
          0.724
PBAL39_07375
Putative outer membrane protein (525 aa)
   
          0.718
PBAL39_13999
Uncharacterized protein (402 aa)
   
          0.716
PBAL39_07475
Uncharacterized protein (600 aa)
   
          0.695
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.689
PBAL39_00612
Putative outer membrane protein (489 aa)
   
          0.687
PBAL39_21185
Putative endoribonuclease (176 aa)
   
          0.671
PBAL39_07370
Putative outer membrane protein (1101 aa)
   
          0.669
PBAL39_14004
TonB-linked outer membrane receptor (794 aa)
   
          0.646
PBAL39_15224
Uncharacterized protein (310 aa)
              0.643
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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