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PBAL39_15244 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15244" - Short-chain dehydrogenase/reductase SDR in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15244Short-chain dehydrogenase/reductase SDR (242 aa)    
Predicted Functional Partners:
PBAL39_15249
Transcriptional regulator (196 aa)
 
          0.724
PBAL39_12890
Putative short-chain dehydrogenase (143 aa)
   
          0.620
PBAL39_19584
Putative short-chain dehydrogenase/reductase SDR (295 aa)
 
          0.609
PBAL39_24163
Short-chain dehydrogenase (271 aa)
   
   
    0.608
PBAL39_02592
Short-chain dehydrogenase (269 aa)
   
          0.598
PBAL39_00762
Short chain dehydrogenase (279 aa)
   
   
    0.579
PBAL39_15239
Alcohol dehydrogenase, zinc-binding protein (333 aa)
              0.549
PBAL39_24088
Probable dehydrogenase/reductase (249 aa)
   
          0.545
PBAL39_18514
Short-chain dehydrogenase/reductase SDR (262 aa)
 
   
    0.538
PBAL39_16384
Short-chain dehydrogenase (271 aa)
   
   
    0.485
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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