STRINGSTRING
PBAL39_15584 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15584" - Possible sugar nucleotide epimerase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15584Possible sugar nucleotide epimerase (326 aa)    
Predicted Functional Partners:
PBAL39_15579
Uncharacterized protein (136 aa)
              0.715
PBAL39_22175
Uncharacterized protein (268 aa)
   
          0.648
PBAL39_15574
Transcriptional regulator, AraC family protein (306 aa)
              0.626
PBAL39_02645
Uncharacterized protein (279 aa)
   
          0.599
PBAL39_24980
Uncharacterized protein (233 aa)
   
          0.576
PBAL39_06656
Uncharacterized protein (459 aa)
   
          0.566
PBAL39_24985
Uncharacterized protein (280 aa)
   
          0.554
PBAL39_17954
Outer membrane protein (874 aa)
   
          0.541
PBAL39_16399
Transcriptional regulator, MarR family protein (161 aa)
   
          0.522
PBAL39_25385
Outer membrane protein (839 aa)
   
          0.509
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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