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PBAL39_15804 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15804" - AsnC family transcriptional regulator in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15804AsnC family transcriptional regulator (153 aa)    
Predicted Functional Partners:
PBAL39_12067
Ornithine carbamoyltransferase (320 aa)
       
  0.510
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
   
   
  0.453
PBAL39_01517
Non-ribosomal peptide synthetase/polyketide synthase (2233 aa)
         
  0.443
PBAL39_18414
DNA polymerase III, epsilon subunit (456 aa)
   
        0.437
PBAL39_12332
Anthranilate synthase component II (190 aa)
       
    0.419
PBAL39_21255
Uroporphyrin-III C-methyltransferase (Uroporphyrinogen III methylase) (256 aa)
   
   
  0.416
PBAL39_20810
Uroporphyrin-III C-methyltransferase (Uroporphyrinogen III methylase) (262 aa)
   
   
  0.416
PBAL39_04358
Uroporphyrin-III C-methyltransferase (Uroporphyrinogen III methylase) (263 aa)
   
   
  0.416
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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