STRINGSTRING
PBAL39_15864 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_15864" - Peptidase S41 in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_15864Peptidase S41 (470 aa)    
Predicted Functional Partners:
PBAL39_15869
Uncharacterized protein (208 aa)
              0.605
PBAL39_25230
CHU large protein uncharacterized (576 aa)
   
          0.500
PBAL39_24715
Putative TonB-dependent outer membrane receptor protein (925 aa)
   
          0.444
PBAL39_03080
Cyclic nucleotide binding regulatory protein (218 aa)
   
          0.441
PBAL39_15469
Uncharacterized protein (127 aa)
   
          0.432
PBAL39_15159
Uncharacterized protein (402 aa)
   
          0.432
PBAL39_12598
Drug/metabolite transporter (DMT) superfamily protein (298 aa)
   
          0.422
PBAL39_05778
Uncharacterized protein (204 aa)
   
          0.410
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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