STRINGSTRING
PBAL39_16004 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16004" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16004Uncharacterized protein (248 aa)    
Predicted Functional Partners:
PBAL39_16009
Uncharacterized protein (259 aa)
 
       
0.855
PBAL39_16019
Twp-component sensor histidine kinase (345 aa)
              0.846
PBAL39_16014
Two-component response regulator (225 aa)
              0.845
PBAL39_16024
Uncharacterized protein (234 aa)
              0.656
PBAL39_21725
Putative sulfatase (642 aa)
   
          0.564
PBAL39_04863
Uncharacterized protein (263 aa)
   
          0.482
PBAL39_17569
CHU large protein glucose/sorbosone dehydrogenase-related (1367 aa)
   
          0.467
PBAL39_17514
Uncharacterized protein (811 aa)
   
          0.455
PBAL39_13427
Uncharacterized protein (308 aa)
   
          0.411
PBAL39_13482
Uncharacterized protein (53 aa)
   
          0.405
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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