STRINGSTRING
PBAL39_16109 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16109" - Putative lipoprotein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16109Putative lipoprotein (217 aa)    
Predicted Functional Partners:
PBAL39_16114
Isoquinoline 1-oxidoreductase, beta subunit (752 aa)
 
          0.826
PBAL39_16104
Uncharacterized protein (62 aa)
              0.787
PBAL39_16119
(2Fe-2S)-binding domain protein (151 aa)
              0.747
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.668
PBAL39_24490
Putative outer membrane protein (1045 aa)
   
          0.588
PBAL39_16099
Transcriptional regulator (298 aa)
              0.508
PBAL39_16094
Uncharacterized protein (44 aa)
              0.508
PBAL39_10446
Uncharacterized protein (386 aa)
   
          0.506
PBAL39_05858
Putative outer membrane protein (988 aa)
   
          0.503
PBAL39_23117
Uncharacterized protein (270 aa)
   
          0.488
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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