STRINGSTRING
PBAL39_16124 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16124" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16124Uncharacterized protein (436 aa)    
Predicted Functional Partners:
PBAL39_23497
Lipoprotein, putative (334 aa)
   
          0.695
PBAL39_14489
Uncharacterized protein (130 aa)
   
          0.670
PBAL39_16134
3-oxoacyl-(Acyl carrier protein) synthase (625 aa)
              0.622
PBAL39_16129
Putative desaturase (235 aa)
              0.622
PBAL39_16139
Uncharacterized protein (294 aa)
              0.606
PBAL39_13457
Uncharacterized protein (148 aa)
   
          0.604
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.570
PBAL39_25640
Uncharacterized protein (194 aa)
   
          0.524
PBAL39_21720
Allergen V5/Tpx-1 related protein (227 aa)
   
          0.520
PBAL39_09891
PKD (1990 aa)
   
          0.482
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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