STRINGSTRING
PBAL39_16169 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16169" - Putative sugar transporter in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16169Putative sugar transporter (392 aa)    
Predicted Functional Partners:
PBAL39_16164
Transcriptional regulator, TetR family protein (199 aa)
              0.634
PBAL39_16089
Putative aldo/keto reductase family protein (283 aa)
   
        0.489
PBAL39_16159
Pyridoxamine 5’-phosphate oxidase-related, FMN-binding protein (202 aa)
              0.441
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]