STRINGSTRING
PBAL39_16249 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16249" - Putative transcriptional regulator in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16249Putative transcriptional regulator (292 aa)    
Predicted Functional Partners:
PBAL39_16254
Nodulation protein L (190 aa)
              0.657
PBAL39_20239
Uncharacterized protein (423 aa)
   
          0.603
PBAL39_16259
Transcriptional regulator (133 aa)
              0.491
PBAL39_16244
Uncharacterized protein (203 aa)
              0.443
PBAL39_25230
CHU large protein uncharacterized (576 aa)
   
          0.412
PBAL39_13270
Putative aminopeptidase (855 aa)
   
          0.412
PBAL39_20990
Uncharacterized protein (158 aa)
   
          0.405
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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