STRINGSTRING
PBAL39_16254 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16254" - Nodulation protein L in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16254Nodulation protein L (190 aa)    
Predicted Functional Partners:
PBAL39_19889
Sugar pyridoxal-phosphate-dependent aminotransferase (362 aa)
   
  0.749
PBAL39_01912
Putative DegT/DnrJ/EryC1/StrS family amino sugar synthetase (419 aa)
   
  0.749
PBAL39_01897
DegT/DnrJ/EryC1/StrS aminotransferase (382 aa)
   
  0.749
PBAL39_16259
Transcriptional regulator (133 aa)
              0.744
PBAL39_22982
Acetyltransferase, GNAT family protein (171 aa)
            0.700
PBAL39_24268
Uncharacterized protein (218 aa)
   
        0.690
PBAL39_04973
Tyrosine-protein kinase (801 aa)
   
   
  0.677
PBAL39_09611
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
   
 
  0.668
PBAL39_05053
Transferase hexapeptide repeat containing protein (190 aa)
   
          0.661
PBAL39_16249
Putative transcriptional regulator (292 aa)
              0.657
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (3%) [HD]