STRINGSTRING
PBAL39_16279 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16279" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16279Uncharacterized protein (456 aa)    
Predicted Functional Partners:
PBAL39_16284
Putative outer membrane protein (1190 aa)
 
          0.962
PBAL39_24355
Uncharacterized protein (1204 aa)
 
          0.779
PBAL39_03374
Putative outer membrane protein (1173 aa)
 
          0.779
PBAL39_22585
Putative outer membrane protein (1198 aa)
   
          0.778
PBAL39_18639
Putative outer membrane protein (1197 aa)
   
          0.778
PBAL39_14299
Uncharacterized protein (481 aa)
   
          0.778
PBAL39_16519
Putative outer membrane protein (928 aa)
   
          0.777
PBAL39_10276
Putative outer membrane protein (1227 aa)
   
          0.777
PBAL39_19434
Uncharacterized protein (466 aa)
   
          0.775
PBAL39_12945
Putative outer membrane protein (1173 aa)
   
          0.770
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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