STRINGSTRING
PBAL39_16314 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16314" - Mechanosensitive ion channel protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16314Mechanosensitive ion channel protein (780 aa)    
Predicted Functional Partners:
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1013 aa)
       
      0.742
PBAL39_17454
Uncharacterized protein (133 aa)
   
          0.688
PBAL39_22580
Putative lipoprotein (497 aa)
   
          0.649
PBAL39_11522
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (335 aa)
       
      0.636
PBAL39_16309
Putative transmembrane ion channel (597 aa)
 
       
0.630
PBAL39_18644
Uncharacterized protein (487 aa)
   
          0.628
PBAL39_16741
Uncharacterized protein (437 aa)
   
          0.614
PBAL39_16284
Putative outer membrane protein (1190 aa)
   
          0.614
PBAL39_17569
CHU large protein glucose/sorbosone dehydrogenase-related (1367 aa)
   
          0.603
PBAL39_22695
Uncharacterized protein (167 aa)
   
          0.601
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]