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PBAL39_16344 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16344" - Transcriptional regulator, AraC family protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16344Transcriptional regulator, AraC family protein (310 aa)    
Predicted Functional Partners:
PBAL39_16339
Short-chain dehydrogenase (268 aa)
 
          0.695
PBAL39_16349
Uncharacterized protein (43 aa)
              0.490
PBAL39_12683
Transcriptional regulator, AraC family protein (278 aa)
   
          0.487
PBAL39_07795
TonB-linked outer membrane receptor P92 (301 aa)
   
          0.468
PBAL39_06631
Transcriptional regulator, AraC family protein (281 aa)
   
          0.453
PBAL39_14559
Transcriptional regulator, AraC family protein (286 aa)
   
          0.444
PBAL39_19534
HI0933-like protein (145 aa)
   
          0.443
PBAL39_16334
Uncharacterized protein (50 aa)
              0.439
PBAL39_09116
Transcriptional regulator, AraC family protein (287 aa)
   
          0.435
PBAL39_15284
Transcriptional regulator, AraC family protein (365 aa)
   
          0.415
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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