STRINGSTRING
PBAL39_16474 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16474" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16474Uncharacterized protein (131 aa)    
Predicted Functional Partners:
PBAL39_02925
3-beta hydroxysteroid dehydrogenase/isomerase (325 aa)
 
          0.712
PBAL39_21290
Uncharacterized protein (196 aa)
   
          0.682
PBAL39_14024
NUDIX hydrolase (165 aa)
   
          0.668
PBAL39_16479
Cyclic nucleotide binding-regulatory protein (100 aa)
              0.623
PBAL39_19050
Short chain dehydrogenase dehydrogenase (264 aa)
   
          0.555
PBAL39_00762
Short chain dehydrogenase (279 aa)
   
          0.497
PBAL39_24143
Uncharacterized protein (120 aa)
   
          0.473
PBAL39_15884
Uncharacterized protein (325 aa)
   
          0.438
PBAL39_16981
Uncharacterized protein (208 aa)
   
          0.421
PBAL39_16956
Uncharacterized protein (89 aa)
   
          0.407
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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