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PBAL39_16479 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16479" - Cyclic nucleotide binding-regulatory protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16479Cyclic nucleotide binding-regulatory protein (100 aa)    
Predicted Functional Partners:
PBAL39_21100
Cyclic nucleotide binding regulatory protein (97 aa)
   
          0.768
PBAL39_20139
Cyclic nucleotide binding-regulatory protein (94 aa)
   
          0.750
PBAL39_18289
Uncharacterized protein (146 aa)
   
          0.667
PBAL39_03080
Cyclic nucleotide binding regulatory protein (218 aa)
   
          0.664
PBAL39_16474
Uncharacterized protein (131 aa)
              0.623
PBAL39_11607
Peptidase S13, D-Ala-D-Ala carboxypeptidase C (448 aa)
   
          0.588
PBAL39_25385
Outer membrane protein (839 aa)
   
          0.576
PBAL39_17564
CHU large protein candidate retaining b-glycosidase, glycoside hydrolase family 5 protein (1640 aa)
   
          0.569
PBAL39_17954
Outer membrane protein (874 aa)
   
          0.562
PBAL39_17974
Uncharacterized protein (404 aa)
   
          0.555
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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