STRINGSTRING
PBAL39_16631 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16631" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16631Putative outer membrane protein (1180 aa)    
Predicted Functional Partners:
PBAL39_16636
Putative outer membrane protein (486 aa)
 
          0.955
PBAL39_00637
Putative outer membrane protein (550 aa)
   
          0.773
PBAL39_16439
Uncharacterized protein (544 aa)
 
 
      0.772
PBAL39_18869
Putative outer membrane protein (589 aa)
   
          0.772
PBAL39_13140
Uncharacterized protein (504 aa)
   
          0.772
PBAL39_20455
Putative lipoprotein (498 aa)
 
          0.769
PBAL39_24123
Uncharacterized protein (473 aa)
   
          0.768
PBAL39_09416
Putative outer membrane protein (546 aa)
   
          0.768
PBAL39_23893
Uncharacterized protein (524 aa)
   
          0.767
PBAL39_00180
Uncharacterized protein (477 aa)
   
          0.766
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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