STRINGSTRING
PBAL39_16651 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16651" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16651Uncharacterized protein (449 aa)    
Predicted Functional Partners:
PBAL39_00300
TonB-dependent siderophore receptor (813 aa)
 
        0.801
PBAL39_10880
Ferrichrome iron receptor (809 aa)
 
        0.751
PBAL39_18809
Ferrichrome-iron receptor (904 aa)
 
        0.749
PBAL39_03334
Ferrichrome iron receptor (778 aa)
 
        0.656
PBAL39_23402
Ferrichrome-iron receptor (801 aa)
 
        0.654
PBAL39_25575
Ferrichrome-iron receptor (762 aa)
 
          0.651
PBAL39_03439
Uncharacterized protein (356 aa)
   
          0.642
PBAL39_07790
Uncharacterized protein (418 aa)
 
          0.595
PBAL39_25425
Membrane spanning protein, required for outer membrane integrity (526 aa)
   
          0.590
PBAL39_20089
Uncharacterized protein (404 aa)
 
          0.583
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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