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EDM35162.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35162.1" - Outer membrane efflux protein/ immunoreative antigen in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35162.1Outer membrane efflux protein/ immunoreative antigen; COG1538 Outer membrane protein (443 aa)    
Predicted Functional Partners:
EDM35164.1
COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1042 aa)
 
      0.927
EDM35163.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (352 aa)
 
      0.927
EDM35165.1
annotation not available (342 aa)
              0.704
EDM35519.1
COG1538 Outer membrane protein (432 aa)
   
          0.582
EDM35161.1
Uncharacterized protein; COG2738 Predicted Zn-dependent protease (232 aa)
              0.560
EDM36744.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (387 aa)
 
      0.506
EDM35709.1
COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1063 aa)
 
      0.490
EDM36745.1
Acriflavin resistance protein D; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1068 aa)
 
      0.490
EDM34851.1
Multidrug resistance protein, AcrB/AcrD family; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1064 aa)
 
      0.482
EDM36987.1
Multidrug efflux membrane fusion protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1034 aa)
 
      0.451
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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