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EDM35175.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35175.1" - COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35175.1COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (199 aa)    
Predicted Functional Partners:
EDM35174.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (343 aa)
 
      0.845
EDM35553.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (392 aa)
   
      0.623
EDM36709.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog (179 aa)
   
          0.600
EDM35640.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (357 aa)
   
      0.596
EDM34981.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (183 aa)
   
          0.591
EDM33871.1
Putative anti sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (349 aa)
   
      0.584
EDM38484.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (369 aa)
   
      0.583
EDM34113.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (397 aa)
   
      0.579
EDM38813.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component (322 aa)
   
      0.577
EDM34152.1
Putative anti-sigma factor; COG2931 RTX toxins and related Ca2+-binding proteins (380 aa)
   
      0.575
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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