STRINGSTRING
PBAL39_16936 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16936" - Response regulator in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16936Response regulator (138 aa)    
Predicted Functional Partners:
PBAL39_01387
Putative two-component system response regulator (135 aa)
   
          0.769
PBAL39_16716
Two component transcriptional regulator, winged helix family protein (121 aa)
   
          0.755
PBAL39_06141
Two-component response regulator (227 aa)
   
          0.719
PBAL39_20344
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (253 aa)
   
          0.717
PBAL39_06726
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (258 aa)
   
          0.692
PBAL39_09586
Response regulator (CheY-like receiver domain and DNA-binding HTH domain) (206 aa)
   
          0.691
PBAL39_12745
Putative two-component system sensor kinase/response regulator fusion protein (273 aa)
   
          0.678
PBAL39_17799
Two-component system response regulator (224 aa)
   
          0.672
PBAL39_10121
Two-component system response regulator (231 aa)
   
          0.652
PBAL39_16014
Two-component response regulator (225 aa)
   
          0.635
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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