STRINGSTRING
PBAL39_16956 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_16956" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_16956Uncharacterized protein (89 aa)    
Predicted Functional Partners:
PBAL39_16961
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (401 aa)
 
          0.968
PBAL39_16489
Thioredoxin reductase carring response regulator receiver domain (555 aa)
 
          0.796
PBAL39_16484
Cyclic nucleotide-binding protein (466 aa)
   
          0.740
PBAL39_12167
Possible cell wall protein (128 aa)
   
          0.641
PBAL39_16966
Uncharacterized protein (58 aa)
              0.562
PBAL39_03217
Uncharacterized protein (127 aa)
   
          0.481
PBAL39_14374
Uncharacterized protein (235 aa)
   
          0.465
PBAL39_17046
Sodium/hydrogen antiporter (538 aa)
            0.443
PBAL39_16474
Uncharacterized protein (131 aa)
   
          0.407
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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