STRINGSTRING
PBAL39_17006 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_17006" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_17006Uncharacterized protein (633 aa)    
Predicted Functional Partners:
PBAL39_17021
Putative hydrolase (221 aa)
 
          0.942
PBAL39_17016
Uncharacterized protein (460 aa)
 
          0.923
PBAL39_17001
Uncharacterized protein (151 aa)
              0.862
PBAL39_15849
Isochorismatase hydrolase (217 aa)
 
          0.851
PBAL39_16991
Uncharacterized protein (228 aa)
 
          0.838
PBAL39_15839
Uncharacterized protein (459 aa)
 
          0.801
PBAL39_17011
Peptidase M17, leucyl aminopeptidase-like protein (244 aa)
              0.708
PBAL39_16996
Starvation-inducible DNA-binding protein (157 aa)
              0.596
PBAL39_17026
Sigma-54-dependent transcriptional regulator (550 aa)
              0.434
PBAL39_17031
Two component, sigma54 specific, transcriptional regulator, Fis family protein (446 aa)
              0.412
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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