• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EDM34018.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34018.1" - Transcriptional regulator for pyruvate dehydrogenase complex, GntR family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34018.1Transcriptional regulator for pyruvate dehydrogenase complex, GntR family protein; COG2186 Transcriptional regulators (217 aa)    
Predicted Functional Partners:
EDM34019.1
Probable membrane transporter protein; COG0730 Predicted permeases (277 aa)
              0.853
EDM34020.1
COG4272 Predicted membrane protein (133 aa)
              0.842
EDM37095.1
COG0281 Malic enzyme (767 aa)
       
  0.740
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (393 aa)
   
 
  0.638
uxaC
COG1904 Glucuronate isomerase (459 aa)
   
 
  0.627
EDM34241.1
COG0277 FAD/FMN-containing dehydrogenases (466 aa)
   
 
  0.565
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (937 aa)
     
   
  0.487
EDM34017.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase (731 aa)
     
      0.482
EDM34000.1
COG2188 Transcriptional regulators (242 aa)
   
 
 
  0.469
EDM38918.1
COG1609 Transcriptional regulators (340 aa)
   
 
 
  0.420
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]