STRINGSTRING
PBAL39_17209 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_17209" - Haemin-degrading in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_17209Haemin-degrading (342 aa)    
Predicted Functional Partners:
PBAL39_18169
Hemin-binding periplasmic protein (276 aa)
   
  0.967
PBAL39_18179
Hemin ABC transporter ATP binding protein (265 aa)
 
  0.908
PBAL39_18174
Permease protein of ABC transporter (348 aa)
 
  0.908
PBAL39_17214
Acetyltransferase (107 aa)
              0.511
PBAL39_16129
Putative desaturase (235 aa)
   
          0.450
PBAL39_15474
Uncharacterized protein (261 aa)
   
          0.417
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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