STRINGSTRING
PBAL39_17229 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_17229" - Putative ferric aerobactin receptor in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_17229Putative ferric aerobactin receptor (773 aa)    
Predicted Functional Partners:
PBAL39_03329
Cytoplasmic membrane protein (363 aa)
 
          0.694
PBAL39_17224
Uncharacterized protein (24 aa)
              0.557
PBAL39_13994
Uncharacterized protein (371 aa)
 
          0.555
PBAL39_13999
Uncharacterized protein (402 aa)
   
          0.551
PBAL39_17959
Uncharacterized protein (786 aa)
   
          0.485
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.472
PBAL39_04573
Conserved protein found in conjugate transposon (213 aa)
   
          0.466
ggt
Gamma-glutamyltranspeptidase periplasmic (554 aa)
              0.437
PBAL39_07785
Uncharacterized protein (448 aa)
 
          0.433
PBAL39_04563
Uncharacterized protein (212 aa)
   
          0.430
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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