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EDM34208.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34208.1" - Beta-xylosidase (1,4-beta-D-xylan xylosidase) in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EDM34208.1Beta-xylosidase (1,4-beta-D-xylan xylosidase); COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (546 aa)    
Predicted Functional Partners:
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
       
  0.824
EDM38562.1
Arabinan endo-1,5-alpha-L-arabinosidase A; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (325 aa)
 
          0.750
EDM36071.1
annotation not available (539 aa)
   
          0.654
EDM34005.1
Putative hydrolase; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (344 aa)
 
   
  0.647
EDM35851.1
Putative hydrolase; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (517 aa)
 
   
  0.645
EDM36996.1
CHU large protein uncharacterized; COG2931 RTX toxins and related Ca2+-binding proteins (3896 aa)
   
 
  0.638
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
         
  0.618
EDM34161.1
Putatuve glycosylhydrolase; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (357 aa)
 
   
  0.598
EDM38342.1
Uncharacterized protein; COG3866 Pectate lyase (454 aa)
   
   
  0.589
EDM37618.1
COG3325 Chitinase (445 aa)
   
          0.563
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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