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EDM33895.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM33895.1" - CHU large protein glucose/sorbosone dehydrogenase-related in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM33895.1CHU large protein glucose/sorbosone dehydrogenase-related; COG1843 Flagellar hook capping protein (1367 aa)    
Predicted Functional Partners:
EDM34869.1
annotation not available (266 aa)
   
          0.730
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
       
  0.722
EDM36993.1
annotation not available (1168 aa)
   
   
    0.719
EDM35542.1
Transcriptional regulator, Crp/Fnr family protein; COG2133 Glucose/sorbosone dehydrogenases (891 aa)
       
    0.683
EDM35819.1
annotation not available (274 aa)
   
          0.662
EDM34263.1
Uncharacterized protein; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (316 aa)
 
          0.647
EDM36995.1
annotation not available (350 aa)
   
          0.625
EDM36992.1
annotation not available (335 aa)
   
          0.611
EDM35601.1
Uncharacterized protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (176 aa)
   
          0.601
EDM35570.1
Uncharacterized protein; COG1626 Neutral trehalase (908 aa)
   
          0.595
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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