STRINGSTRING
PBAL39_18029 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18029" - Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18029Transcriptional regulator (352 aa)    
Predicted Functional Partners:
PBAL39_18034
Sensor histidine kinase (394 aa)
          0.956
PBAL39_15294
Two-component hybrid sensor and regulator (512 aa)
          0.717
PBAL39_17984
Uncharacterized protein (61 aa)
 
          0.706
PBAL39_18019
Coproporphyrinogen-III oxidase (460 aa)
 
          0.703
PBAL39_21100
Cyclic nucleotide binding regulatory protein (97 aa)
   
          0.658
PBAL39_04114
Two-component system sensor histidine kinase (445 aa)
 
          0.648
PBAL39_18549
Sensor for ctr capsule biosynthesis sensor histidine kinase (684 aa)
 
          0.618
PBAL39_18024
D-lactate dehydrogenase (149 aa)
              0.617
PBAL39_25515
Uncharacterized protein (767 aa)
   
          0.612
PBAL39_03344
Sensory box histidine kinase/response regulator (769 aa)
   
          0.612
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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