STRINGSTRING
PBAL39_18039 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18039" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18039Uncharacterized protein (600 aa)    
Predicted Functional Partners:
PBAL39_08796
Uncharacterized protein (292 aa)
   
          0.709
PBAL39_18034
Sensor histidine kinase (394 aa)
 
          0.685
PBAL39_07950
Uncharacterized protein (90 aa)
   
          0.665
PBAL39_02142
Putative TonB-linked outer membrane protein (985 aa)
   
          0.661
PBAL39_18029
Transcriptional regulator (352 aa)
 
          0.600
PBAL39_07715
Putative secreted protein (543 aa)
   
          0.599
PBAL39_15474
Uncharacterized protein (261 aa)
   
          0.593
PBAL39_24985
Uncharacterized protein (280 aa)
   
          0.591
PBAL39_02297
Uncharacterized protein (134 aa)
   
          0.585
PBAL39_11607
Peptidase S13, D-Ala-D-Ala carboxypeptidase C (448 aa)
   
          0.562
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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