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PBAL39_18089 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18089" - C4-dicarboxylate transport transcriptional regulatory protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18089C4-dicarboxylate transport transcriptional regulatory protein (468 aa)    
Predicted Functional Partners:
PBAL39_24785
RNA polymerase, sigma-54 factor (489 aa)
 
   
  0.951
PBAL39_24455
Histidine kinase (1225 aa)
 
 
  0.914
PBAL39_20765
Response regulator receiver domain protein (CheY-like) (452 aa)
 
  0.838
PBAL39_20384
Two-component system sensor histidine kinase/response (1090 aa)
   
  0.832
PBAL39_10151
Two-component sensor histidine kinase, phosphate regulation (341 aa)
 
  0.799
PBAL39_17204
Two-component system sensor histidine kinase/response regulator hybrid (1338 aa)
   
0.797
PBAL39_15289
Sensory box histidine kinase (503 aa)
 
  0.796
PBAL39_20344
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (253 aa)
  0.795
PBAL39_18549
Sensor for ctr capsule biosynthesis sensor histidine kinase (684 aa)
 
  0.794
PBAL39_23357
Integral membrane sensor signal transduction histidine kinase (288 aa)
 
  0.790
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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