STRINGSTRING
PBAL39_18099 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18099" - Pseudouridylate synthase in Pedobacter sp. BAL39
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
PBAL39_18099Pseudouridylate synthase (240 aa)    
Predicted Functional Partners:
PBAL39_02237
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (332 aa)
   
  0.872
PBAL39_18094
Putative chloride channel protein (595 aa)
              0.824
PBAL39_19459
Uncharacterized protein (245 aa)
 
 
   
  0.802
PBAL39_08821
Pseudouridine synthase (463 aa)
 
  0.773
PBAL39_18104
Two-component response regulator (229 aa)
              0.772
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B ; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (487 aa)
 
        0.690
PBAL39_04134
Uncharacterized protein (98 aa)
   
          0.658
PBAL39_03232
tRNA pseudouridine synthase C (235 aa)
 
 
0.644
PBAL39_19325
RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)
   
          0.644
PBAL39_08010
Ribosomal large subunit pseudouridine synthase D (228 aa)
 
 
0.635
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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