STRINGSTRING
PBAL39_18119 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18119" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18119Uncharacterized protein (88 aa)    
Predicted Functional Partners:
PBAL39_18124
Carboxyl-terminal protease (417 aa)
              0.640
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B ; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (487 aa)
              0.625
PBAL39_18109
Thioredoxin family protein (369 aa)
              0.625
PBAL39_18129
Uncharacterized protein (238 aa)
              0.585
PBAL39_18104
Two-component response regulator (229 aa)
              0.438
PBAL39_18134
Uncharacterized protein (258 aa)
              0.416
PBAL39_18144
Uncharacterized protein (274 aa)
              0.403
PBAL39_18139
Uncharacterized protein (256 aa)
              0.403
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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