STRINGSTRING
PBAL39_18154 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18154" - Transcriptional regulator, AraC family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18154Transcriptional regulator, AraC family protein (331 aa)    
Predicted Functional Partners:
PBAL39_18159
Heme oxygenase (187 aa)
   
        0.818
PBAL39_25085
Transcriptional regulator, AraC family protein (285 aa)
   
          0.777
PBAL39_25015
Transcriptional regulator, AraC family protein (271 aa)
   
          0.765
PBAL39_10781
Putative AraC transcriptional regulatory protein (302 aa)
   
     
  0.747
PBAL39_05123
Transcriptional regulator (307 aa)
   
          0.742
PBAL39_14249
Transcriptional regulator, AraC family protein (309 aa)
   
          0.734
PBAL39_18164
Outer membrane receptor for transport of vitamin B, putative (788 aa)
 
   
  0.692
PBAL39_24198
Two-component system sensor histidine kinase (268 aa)
   
          0.691
PBAL39_02870
Transcriptional regulator ExsA (269 aa)
   
          0.674
PBAL39_00752
Putative AraC-family regulatory protein (283 aa)
   
   
    0.667
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]