STRINGSTRING
PBAL39_18199 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_18199" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_18199Uncharacterized protein (675 aa)    
Predicted Functional Partners:
PBAL39_18204
Competence protein (588 aa)
              0.860
PBAL39_21645
Uncharacterized protein (271 aa)
   
          0.726
PBAL39_19275
Putative lipoprotein (167 aa)
   
          0.701
PBAL39_18194
Transcriptional regulator (111 aa)
              0.676
PBAL39_01022
Uncharacterized protein (893 aa)
   
          0.672
PBAL39_08574
Uncharacterized protein (1009 aa)
   
          0.654
PBAL39_19305
Uncharacterized protein (999 aa)
   
          0.642
PBAL39_06541
Putative cationic 19 kDa outer membrane protein (176 aa)
   
          0.637
PBAL39_01797
Putative exported outer membrane protein (502 aa)
   
          0.621
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (241 aa)
   
          0.616
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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